STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA6442Conserved hypothetical protein. (80 aa)    
Predicted Functional Partners:
ebA6443
Predicted permease.
 
  
 0.953
ahpC
Predicted peroxiredoxin.
  
 0.709
cutA2
Thiol-disulfide interchange protein,potentially involved in divalent cation resistance; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily.
  
 
 0.664
ebA6447
Hypothetical protein.
       0.590
fdhB
Formate dehydrogenase, NAD(P) reducing, beta subunit.
  
 
 0.583
ebA5705
CoA ligase, AMP generating (three fragments in different reading frames).
   
 
 0.570
ebA2099
NADH oxidase (NOXB-2.
  
 0.556
lpd
Pyruvate dehydrogenase multienzyme complex, Dihydrolipoamide dehydrogenase component.
  
 0.503
merA
Similar to mercuric reductase.
  
 0.490
ebA4535
Fragment of conserved hypothetical protein, predicted Pyridine nucleotide-disulphide oxidoreductase family.
   
 0.474
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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