STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6443Predicted permease. (489 aa)    
Predicted Functional Partners:
ebA6442
Conserved hypothetical protein.
 
  
 0.955
ebA6447
Hypothetical protein.
       0.590
ebA5251
Predicted S-adenosylmethionine-dependent tRNA (guanine-N(7)-)-methyltransferase.
  
    0.527
ebA6581
Conserved hypothetical protein.
   
    0.515
ebA2026
Putative regulatory protein, LuxR.
  
     0.446
trmB
tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA(m7G46)-methyltransferase); Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
    0.443
ebA5917
Conserved hypothetical protein.
   
    0.443
hsdR
Type I restriction-modification system endonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.416
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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