STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6466ATPase component ABC-type dipeptide/oligopeptide/nickel transport system; Belongs to the ABC transporter superfamily. (660 aa)    
Predicted Functional Partners:
ebA5658
Putative peptide ABC transporter permease protein.
 
 0.995
ebA5655
Putative peptide ABC transporter permease protein.
 
 0.983
oppB
Oligopeptide transport system permease protein oppB.
 
 0.983
oppC
Oligopeptide transport system permease protein.
 
 0.981
ebA5660
Probable ABC transporter substrate binding protein.
 
 
 0.974
ebA5654
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 
0.906
oppA
Oligopeptide-binding protein oppA precursor.
 
  
 0.694
slyD
FKBP-type peptidyl-prolyl cis-trans isomerase (Rotamase) protein.
       0.479
bcp-2
Alkyl hydroperoxide reductase.
       0.479
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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