Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ebA6513Transcriptional regulatory protein,TetR family. (196 aa)    
Predicted Functional Partners:
ebA2549
N6 adenine-specific DNA methyltransferase, N12 class.
  
    0.685
etfA
Electron transfer flavoprotein alpha subunit.
  
  
 0.592
etfB
Electron transfer flavoprotein, beta-subunit.
  
    0.582
ebB92
Hypothetical protein.
  
     0.559
ebD121
Probable integral membrane protein.
       0.455
padR
PadR protein, putative regulator of anaerobic phenylacetate metabolism.
  
    0.441
ebA4108
Hypothetical protein.
  
     0.433
ebA3626
Hypothetical protein.
  
     0.421
ebA6506
Acyl-CoA dehydrogenase.
 
   
 0.413
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.407
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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