STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6519Hypothetical protein putative lipoprotein. (218 aa)    
Predicted Functional Partners:
ebA6521
Phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein; Periplasmic component of probable ABC-type transport system involved in resistance to organic solvents.
 
   0.959
ebA6524
Possible ABC transport permease.
 
  
 0.941
ebA6523
ATPase component, ABC-type transport system.
 
    0.907
ppx
Putative exopolyphosphatase (EC 3.6.1.11).
       0.755
ebA3176
Hypothetical protein.
  
     0.637
ebA6518
Probable CoA ligase (AMP-forming).
       0.632
ebA6516
Enoyl coenzyme A hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.579
ebA6064
Probable thioredoxin-like protein.
  
     0.548
tatD-2
Putative tatD deoxyribonuclease.
       0.543
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
       0.534
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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