STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6581Conserved hypothetical protein. (608 aa)    
Predicted Functional Partners:
ebA6583
Predicted DNA helicase.
 
   
 0.935
hsdR
Type I restriction-modification system endonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.761
hsdM
Type I site-specific deoxyribonuclease,methylase subunit.
  
  
 0.756
ebA6579
Conserved hypothetical protein.
       0.726
hsdS
Restriction modification system specificity subunit.
  
  
 0.725
ebA6580
Conserved hypothetical protein.
       0.720
ebA675
Conserved hypothetical protein, potential type III restriction enzyme.
  
    0.657
ebA6443
Predicted permease.
   
    0.515
ebA2500
Conserved hypothetical protein.
  
    0.486
ebA5855
Probable ATP-dependent DNA helicase.
  
    0.486
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.