STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6593Hypothetical protein, possible lipoprotein. (226 aa)    
Predicted Functional Partners:
ebA6594
Transglycosylase SLT domain protein.
 
     0.816
ebA6597
Hypothetical protein.
       0.773
ebA4407
Outer membrane lipoprotein containing OmpA/MotB domain.
  
     0.698
tolB
tolB protein precursor, periplasmic component of the Tol biopolymer transport system; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.648
ebA913
Bacterial outer membrane protein.
  
     0.561
ebA5997
Putative outer membrane protein; Belongs to the skp family.
 
 
 0.533
traF
Similar to plasmid-like sex pilus assembly protein TraF.
  
  
 0.533
ebA6601
Hypothetical protein.
       0.524
traB
Plasmid-like sex pilus assembly protein TraB.
       0.524
traV
Similar to plasmid-like pilus assembly protein traV.
       0.524
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.