STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA6631Hypothetical protein. (123 aa)    
Predicted Functional Partners:
traN
Similar to plasmid-like mating pair stabilization protein precursor TraN.
       0.798
traF-2
Similar to plasmid like sex pilus assembly protein traF.
       0.768
traH
Similar to plasmid like pilus assembly and synthesis protein precursor TraH.
       0.758
traG
Similar to plasmid-like sex pilus assembly and mating pair stabilization protein TraG.
       0.650
traU
Similar to plasmid-like sex pilus assembly and synthesis protein traU.
       0.589
trbC
Similar to plasmid-like sex pilus assembly and mating formation protein precursor trbC.
       0.589
traW
Similar to plasmid-like transfer protein traW.
       0.588
traF
Similar to plasmid-like sex pilus assembly protein TraF.
       0.573
ebD18
Conserved hypothetical protein.
       0.559
ebD17
Conserved hypothetical protein.
       0.553
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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