STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA6743Conserved hypothetical protein,predicted secretion protein HlyD family. (355 aa)    
Predicted Functional Partners:
ebA6745
ABC transporter.
 
  
 0.968
yhiH
Putative ABC transporter ATP-binding protein yhiH.
 
  
 0.966
macB
Transmembrane ATP-binding ABC transporter protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
  
 0.733
opmR
Outer membrane protein oprM precursor.
 
 
 0.631
ebA1847
Probable outer membrane protein.
 
 
 0.603
ebA3445
Putative outer membrane protein.
 
 
 0.585
ebA6738
Transcriptional regulator, TetR family.
  
  
 0.578
tolC-2
Outer membrane channel protein.
 
 
 0.571
ebA4059
Putative ABC transporter protein.
 
  
 0.556
tolC
Type I secretion outer membrane efflux protein.
  
 
 0.543
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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