STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhiHPutative ABC transporter ATP-binding protein yhiH. (972 aa)    
Predicted Functional Partners:
ebA6743
Conserved hypothetical protein,predicted secretion protein HlyD family.
 
  
 0.967
ebA6745
ABC transporter.
 
 
0.948
ebA2851
Conserved hypothetical protein.
  
  
 0.807
nosY
Probable transmembrane protein.
  
 
 0.800
ebA4029
Nitroreductase family protein.
  
  
 0.646
moeY
Hypothetical protein, possible molybdopterin biosynthesis protein MoeY.
  
  
 0.646
norM
Predicted multi antimicrobial extrusion protein MatE; Multidrug efflux pump; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
  
  
 0.615
ebA6738
Transcriptional regulator, TetR family.
     
 0.609
ebA1304
Probable ABC transporter.
  
 
 0.606
nodJ
Nodulation protein J.
  
 
 0.606
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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