STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6758Conserved hypothetical protein. (214 aa)    
Predicted Functional Partners:
tatA
Sec-independent protein translocase subunit A; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.557
tatB
Sec-independent protein translocase subunit B; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
   
 
 0.557
ilvD-2
Dihydroxy-acid dehydratase 3; Belongs to the IlvD/Edd family.
  
    0.541
amiC
Potential peptidoglycan amidase, C-terminal fragment.
  
   0.529
amiC-2
N-acetylmuramoyl-L-alanine amidase, AMIC precursor protein.
  
   0.529
ebA3386
Conserved hypothetical protein,predicted 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.498
hflC
Putative membrane-bound regulator HflC; HflC and HflK could regulate a protease.
   
 0.456
ebA1253
Band 7 protein; HflC and HflK could encode or regulate a protease.
   
 0.456
ebA2633
Putative stomatin-like transmembrane protein.
   
 0.456
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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