STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
istA-40Transposase. (277 aa)    
Predicted Functional Partners:
tnpF19
Probable transposase (fragment).
 
  
 0.870
tnpF
Transposase, fragment.
     
 0.714
ebA6775
Hypothetical protein, fragment of flavin-containing monoxygenase.
   
   0.509
istB-36
Transposition helper protein, fragment.
     
 0.494
istA-45
Transposase.
 
  
 0.450
istB-41
Transposase.
 
  
 0.450
tnp42A
Probable transposase, N-terminal half.
 
  
 0.450
istB-44
Probable transposase.
 
  
 0.450
istBp-2
Probable transposition helper protein, N-terminal fragment.
 
  
 0.450
rec2
DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.435
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.