STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
capCCapsular polysaccharide biosynthesis protein. (266 aa)    
Predicted Functional Partners:
gumC
Exopolysaccharide biosynthesis protein.
  
 0.939
ebA4284
Predicted molecular weight phosphotyrosine protein phosphatase.
     
 0.905
ebA5440
Low molecular weight phosphotyrosine protein phosphatase.
     
 0.905
gumB
Polysaccharide export protein.
 
   
 0.794
ebA4250
Probable exopolysaccharide biosynthesis protein.
  
 0.767
ebA5975
Probable binding-protein-dependent transport system protein.
 
    0.767
ebA6787
Hypothetical protein.
 
     0.739
wcaJ
Colanic biosynthesis UDP-glucose lipid carrier transferase.
 
  
 0.611
ebA6795
Hypothetical protein containing domain similar to chaperone protein type DnaJ.
       0.479
ebA5903
Probable sugar transferase, WBGY.
 
  
 0.448
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.