STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6810Putative terpenoid synthase. (277 aa)    
Predicted Functional Partners:
ebA6811
Conserved hypothetical protein,potential squalene/phytoene dehydrogenase.
    0.977
ebA6809
Probable terpenoid synthase-related protein.
 
  
0.941
ispA
Polyprenyl synthetase (EC 2.5.1.10),gene: ISPA OR NE1160; Belongs to the FPP/GGPP synthase family.
 
 0.939
ispB
Polyprenyl synthetase (EC 2.5.1.-), gene: ISPB OR NE1915; Belongs to the FPP/GGPP synthase family.
  
 0.910
ebA3652
Hypothetical protein.
  
  
  0.838
uppS
Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
 
 0.824
ebA6822
Conserved hypothetical protein.
    
 0.799
norM
Predicted multi antimicrobial extrusion protein MatE; Multidrug efflux pump; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
   
 
 0.743
fdhB
Formate dehydrogenase, NAD(P) reducing, beta subunit.
     
 0.717
gapA
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.670
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.