STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfiQAcyl-CoA synthetase (ADP forming). (895 aa)    
Predicted Functional Partners:
ebA775
Conserved hypothetical protein.
 
   
 0.564
ebA6832
Predicted aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.
       0.563
ebA5272
Putative acetyltransferase.
  
 
 0.551
ebA2840
Transcriptional regulator, Sir2 family.
  
  
 0.487
npd
NAD-dependent deacetylase 2 (sirtuin/SIR2 like protein).
  
  
 0.487
pta
Putative phosphate acetyltransferase (EC 2.3.1.8), gene: PTA OR RPA4567.
  
  
 0.446
ebA6834
Conserved hypothetical protein, putative s1 rna binding domain protein.
       0.444
ebA6824
Sensory box histidine kinase.
       0.439
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.