STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6904Conserved hypothetical protein. (175 aa)    
Predicted Functional Partners:
ebA6907
Putative glycosyl transferase.
 
     0.587
ebA6908
Conserved hypothetical protein,predicted short-chain dehydrogenase/reductase SDR family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.550
ebA6912
ADP-heptose--LPS heptosyltransferase II.
 
     0.538
rfaG
Glycosyltransferase.
 
     0.535
ebA6991
Putative oxidoreductase (related to short-chain alcohol dehydrogenases).
  
    0.520
ebA6902
Putative sigma-54 interacting response regulator.
       0.496
ebA6910
HAD-superfamily hydrolase.
       0.467
ebA6655
ATP-dependent DNA ligase.
 
     0.452
ebA4336
Hypothetical protein.
   
    0.430
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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