STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6907Putative glycosyl transferase. (419 aa)    
Predicted Functional Partners:
ebA6912
ADP-heptose--LPS heptosyltransferase II.
 
  
 0.944
rfaG
Glycosyltransferase.
 
     0.931
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
  
 0.925
ebA6910
HAD-superfamily hydrolase.
 
   
 0.916
ebA6908
Conserved hypothetical protein,predicted short-chain dehydrogenase/reductase SDR family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.898
ebA6565
Predicted glycosyl transferase.
 
  
 0.756
ebA7020
Predicted glycosyl transferase probable ADP-heptose:LPS heptosyltransferase.
 
  
 0.743
ebA7025
Hypothetical protein.
 
 
 0.742
ebD124
Conserved hypothetical protein.
  
     0.714
ebA6952
Hypothetical protein.
  
     0.666
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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