STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6930Hypothetical protein. (228 aa)    
Predicted Functional Partners:
ebA6920
Putative maltooligosyltrehalose trehalohydrolase.
 
  
 0.784
glgX
Glycogen operon protein GlgX (alpha amylase); Belongs to the glycosyl hydrolase 13 family.
 
  
 0.771
topA
Type I topoisomerase.
 
     0.766
glgA
Putative glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
  
 0.690
ebA6926
Conserved hypothetical protein.
 
     0.669
ebA2139
Hypothetical protein.
 
    0.664
ebA7001
Putative alpha amylase/trehalose synthase.
  
    0.599
ebA6655
ATP-dependent DNA ligase.
 
    0.565
treY
Putative fusion of 4-alpha glucanotransferase and maltooligosyltrehalose synthase.
 
    0.553
ebA791
Probable complex regulator protein containing response regulator receiver and signal transduction histidine kinase domains.
  
  
 0.525
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.