STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6933Putative membrane protein. (191 aa)    
Predicted Functional Partners:
rpoN2
RNA polymerase sigma N (Sigma 54) factor transcription regulator protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.732
ebA6934
Conserved hypothetical protein,predicted glycosyltransferase.
  
    0.607
ebA6939
Conserved hypothetical protein.
       0.601
ebB174
Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.446
bfr
Bacterioferritin; Iron-storage protein.
   
  
 0.428
bfr-2
Bacterioferritin subunit; Belongs to the bacterioferritin family.
   
  
 0.428
ebA54
Conserved hypothetical protein,predicted bacterioferritin family; Belongs to the Dps family.
   
  
 0.428
ebA6943
Bacterioferritin.
   
  
 0.428
ebA6959
Hypothetical protein.
  
    0.405
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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