Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA6939Conserved hypothetical protein. (283 aa)    
Predicted Functional Partners:
ebA6934
Conserved hypothetical protein,predicted glycosyltransferase.
 
    0.934
ebA4594
Conserved hypothetical protein.
  
     0.630
ebA6933
Putative membrane protein.
       0.601
rpoN2
RNA polymerase sigma N (Sigma 54) factor transcription regulator protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.570
ebB101
Hypothetical protein.
  
    0.458
ebA7259
Conserved hypothetical protein.
  
     0.443
ebB83
Conserved hypothetical protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.
  
     0.422
ebA3993
Conserved hypothetical protein,predicted protein kinase family.
 
     0.418
ebA3984
Carbamoyltransferase, NodU family.
  
   
 0.413
ebA5226
Conserved hypothetical protein.
  
     0.412
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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