STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6963Conserved hypothetical protein. (393 aa)    
Predicted Functional Partners:
ebA6960
Hypothetical protein.
       0.746
ebA6987
Hypothetical protein.
  
   
 0.534
coxC-2
Subunit III of cytochrome c oxidase,also similar to C-terminal domain of long variants of subunit I.
  
     0.526
ebA6959
Hypothetical protein.
       0.499
cycA
Di-heme cytochrome c (class I), probably related to cytochrome c oxidase function.
 
     0.492
ctaC
Cytochrome c1, probably related to cytocrome c oxidase function.
  
     0.459
fdh
Putative glutathione-dependent formaldehyde dehydrogenase.
 
     0.434
ebA4555
Conserved hypothetical protein.
  
     0.405
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.