STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6981Hypothetical protein, predicted Glutamate--cysteine ligase. (435 aa)    
Predicted Functional Partners:
rimK
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase).
 
   
 0.957
ebA6971
Hypothetical protein.
 
     0.952
ebA6983
Predicted N-formylglutamate amidohydrolase.
 
     0.952
ggt
Gamma-glutamyltranspeptidase precursor.
  
 
 0.924
gshB
Glutathione synthetase (GSH synthetase); Belongs to the prokaryotic GSH synthase family.
    
 0.916
ebA2547
Putative glutamate-cysteine ligase.
     
  0.900
pepN
Probable aminopeptidase N (Alpha-aminoacylpeptide hydrolase).
     
  0.900
pepA
Putative cytosolic aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
     
  0.900
metC
Cystathionine beta-lyase, putative (EC 4.4.1.8), gene: metC.
     
 0.806
gltD
Glutamate synthase, small subunit.
   
 
  0.800
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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