Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ebA6991Putative oxidoreductase (related to short-chain alcohol dehydrogenases). (288 aa)    
Predicted Functional Partners:
fdh
Putative glutathione-dependent formaldehyde dehydrogenase.
 
  
 0.710
ebA5705
CoA ligase, AMP generating (three fragments in different reading frames).
  
 
 0.694
topA
Type I topoisomerase.
  
 
   0.607
ebA6994
Hypothetical protein; INTERPRO-suggestion: probable Ferritin-like.
  
    0.606
ebB244
Hypothetical protein.
 
     0.599
ebA6987
Hypothetical protein.
 
  
 0.591
ebA6997
Conserved hypothetical protein.
 
    0.548
ebA6655
ATP-dependent DNA ligase.
  
   
 0.538
ebA6904
Conserved hypothetical protein.
  
    0.520
ebA2139
Hypothetical protein.
  
     0.502
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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