STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA7069Hypothetical protein. (243 aa)    
Predicted Functional Partners:
ebA7066
Conserved hypothetical protein.
 
     0.936
ebA7065
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.929
ebA7067
Predicted polysaccharide deacetylase.
 
     0.927
ebA7063
Putative lauroyl/myristoyl acyltransferase involved in LPS biosynthesis.
 
     0.916
ebA7073
Conserved hypothetical protein.
 
     0.880
fabA
Potential 3-hydroxydecyl-(acyl carrier protein) dehydratase.
 
     0.871
ebA7058
Predicted transmembrane protein.
 
     0.831
ebA7059
Conserved hypothetical protein,potential CoA ligase (AMP forming).
 
     0.816
acpP-2
Acyl carrier protein.
 
     0.812
fabF1
Probable 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.805
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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