STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA7073Conserved hypothetical protein. (269 aa)    
Predicted Functional Partners:
fabA
Potential 3-hydroxydecyl-(acyl carrier protein) dehydratase.
 
   
 0.962
fabG1
3-oxoacyl-[ACP] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.960
fabF1
Probable 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.957
acpP-2
Acyl carrier protein.
 
 
 0.952
ebA7065
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
   
 0.908
ebA7066
Conserved hypothetical protein.
 
     0.908
ebA7063
Putative lauroyl/myristoyl acyltransferase involved in LPS biosynthesis.
 
    0.902
ebA7067
Predicted polysaccharide deacetylase.
 
     0.901
ebA7069
Hypothetical protein.
 
     0.880
ebA5705
CoA ligase, AMP generating (three fragments in different reading frames).
 
 
 0.877
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.