STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA7076Predicted glycosyl transferase, family 2. (287 aa)    
Predicted Functional Partners:
ebA7063
Putative lauroyl/myristoyl acyltransferase involved in LPS biosynthesis.
     0.977
acpP-2
Acyl carrier protein.
 
  
 0.800
ebA7066
Conserved hypothetical protein.
 
    0.798
ebA7065
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
    0.790
ebA7059
Conserved hypothetical protein,potential CoA ligase (AMP forming).
 
     0.786
ebA7073
Conserved hypothetical protein.
 
     0.786
ebA7058
Predicted transmembrane protein.
 
     0.785
fabA
Potential 3-hydroxydecyl-(acyl carrier protein) dehydratase.
 
     0.782
ebA7067
Predicted polysaccharide deacetylase.
 
  
 0.772
fabF1
Probable 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.751
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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