STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA7101Cation/multidrug efflux pump protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1024 aa)    
Predicted Functional Partners:
ebA7103
Putative HlyD-like secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.996
acrA-2
AcrA/AcrE family putative membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.982
acrA
Acriflavin resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.962
tolC
Type I secretion outer membrane efflux protein.
  
 0.938
acrB
Acriflavine resistance protein B.
  
  
 
0.914
acrB-2
Predicted acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  
 
0.914
opmR
Outer membrane protein oprM precursor.
 
 0.903
ebA1847
Probable outer membrane protein.
 0.892
tolC-2
Outer membrane channel protein.
 
 0.877
ebA3445
Putative outer membrane protein.
 
 0.873
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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