STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA7158Conserved hypothetical protein. (407 aa)    
Predicted Functional Partners:
ebA7156
Conserved hypothetical protein.
  
    0.620
wrbA-2
Flavodoxin-like protein; Belongs to the WrbA family.
       0.580
btuE
Putative glutathione peroxidase protein; Belongs to the glutathione peroxidase family.
   
  
 0.525
ompC
Outer membrane protein (porin), similar to outer membrane porin protein 32 precursor (OMP32).
      
 0.517
ompC-2
Outer membrane protein (porin).
      
 0.517
ompC-3
Outer membrane protein (porin).
      
 0.517
ebA7160
Hypothetical protein.
       0.476
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.