Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| bamA | ebA1253 | ebA5996 | ebA1253 | Probable outer membrane protein/surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Band 7 protein; HflC and HflK could encode or regulate a protease. | 0.410 |
| bamA | ebA7188 | ebA5996 | ebA7188 | Probable outer membrane protein/surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Putative peptidase family M48 protein. | 0.522 |
| bamA | ostA | ebA5996 | ebA1141 | Probable outer membrane protein/surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Organic solvent tolerance transmembrane protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Belongs to the LptD family. | 0.790 |
| bamA | surA | ebA5996 | ebA1140 | Probable outer membrane protein/surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | PpiC-type peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | 0.666 |
| bamA | tolC | ebA5996 | ebA1642 | Probable outer membrane protein/surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Type I secretion outer membrane efflux protein. | 0.429 |
| ebA1051 | ebA7188 | ebA1051 | ebA7188 | Peptidase family M23 protein. | Putative peptidase family M48 protein. | 0.639 |
| ebA1253 | bamA | ebA1253 | ebA5996 | Band 7 protein; HflC and HflK could encode or regulate a protease. | Probable outer membrane protein/surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.410 |
| ebA1253 | ebA7188 | ebA1253 | ebA7188 | Band 7 protein; HflC and HflK could encode or regulate a protease. | Putative peptidase family M48 protein. | 0.422 |
| ebA1253 | hflC | ebA1253 | ebA1252 | Band 7 protein; HflC and HflK could encode or regulate a protease. | Putative membrane-bound regulator HflC; HflC and HflK could regulate a protease. | 0.998 |
| ebA7188 | bamA | ebA7188 | ebA5996 | Putative peptidase family M48 protein. | Probable outer membrane protein/surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.522 |
| ebA7188 | ebA1051 | ebA7188 | ebA1051 | Putative peptidase family M48 protein. | Peptidase family M23 protein. | 0.639 |
| ebA7188 | ebA1253 | ebA7188 | ebA1253 | Putative peptidase family M48 protein. | Band 7 protein; HflC and HflK could encode or regulate a protease. | 0.422 |
| ebA7188 | ebA779 | ebA7188 | ebA779 | Putative peptidase family M48 protein. | Putative peptidase. | 0.574 |
| ebA7188 | hflC | ebA7188 | ebA1252 | Putative peptidase family M48 protein. | Putative membrane-bound regulator HflC; HflC and HflK could regulate a protease. | 0.442 |
| ebA7188 | moaC | ebA7188 | ebA7189 | Putative peptidase family M48 protein. | Molybdenum cofactor biosynthesis protein C. | 0.574 |
| ebA7188 | ostA | ebA7188 | ebA1141 | Putative peptidase family M48 protein. | Organic solvent tolerance transmembrane protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Belongs to the LptD family. | 0.469 |
| ebA7188 | surA | ebA7188 | ebA1140 | Putative peptidase family M48 protein. | PpiC-type peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | 0.427 |
| ebA7188 | tolC | ebA7188 | ebA1642 | Putative peptidase family M48 protein. | Type I secretion outer membrane efflux protein. | 0.486 |
| ebA779 | ebA7188 | ebA779 | ebA7188 | Putative peptidase. | Putative peptidase family M48 protein. | 0.574 |
| hflC | ebA1253 | ebA1252 | ebA1253 | Putative membrane-bound regulator HflC; HflC and HflK could regulate a protease. | Band 7 protein; HflC and HflK could encode or regulate a protease. | 0.998 |
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