STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA7217SpoVT-AbrB domain-containing protein; Conserved hypothetical protein related to putative virulence-associated proteins and nitrogen regulatory protein NtrP. (76 aa)    
Predicted Functional Partners:
vapC-3
Conserved hypothetical protein, similar to virulence associated protein VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
 0.975
vapC-2
Similar to virulence-associated protein VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
 0.897
ebD36
Conserved hypothetical protein, similar to virulence-associated protein VapC.
 
 
 0.894
VapC
Predicted nucleic acid-binding protein,contains PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
 0.890
vapB
Virulence associated protein B.
  
     0.760
stbB
Plasmid stability protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
 0.705
ebB61
Conserved hypothetical protein.
 
 
 0.662
ebA3774
Predicted nucleic acid-binding protein,contains PIN domain.
 
 
 0.605
ebD16
Conserved hypothetical protein.
  
   
 0.591
ebA5961
Conserved hypothetical protein.
  
 
 0.552
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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