STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA7243Phage-related minor tail protein. (1136 aa)    
Predicted Functional Partners:
ebA7242
Hypothetical protein.
 
     0.885
ebB249
Hypothetical protein.
 
     0.880
ebA7239
Hypothetical protein.
       0.767
ebA7267
Putative lysozyme.
  
    0.720
ebA7252
Hypothetical protein.
  
    0.669
ebA7253
Hypothetical protein.
       0.565
ebA7278
Terminase (bacteriophage), large subunit.
 
    0.563
ebA7235
Hypothetical protein.
 
     0.554
ebA7269
Phage portal protein, lambda family.
 
    0.477
ebA7259
Conserved hypothetical protein.
 
     0.476
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.