STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA7278Terminase (bacteriophage), large subunit. (681 aa)    
Predicted Functional Partners:
ebB250
Conserved hypothetical protein.
 
  
 0.905
ebA7269
Phage portal protein, lambda family.
 
  
 0.849
ebA7287
Hypothetical protein.
 
   
 0.811
ebA7281
Hypothetical protein.
  
    0.802
ebA7259
Conserved hypothetical protein.
 
     0.781
ebA7252
Hypothetical protein.
  
  
 0.733
ebA7243
Phage-related minor tail protein.
 
    0.563
ebA7232
Phage-related lysozyme.
 
   
 0.482
ebA7261
Similar to Fels-1 prophage protease subunits of ATP-dependent protease; Belongs to the peptidase S14 family.
 
  
 0.481
ebA11
Conserved hypothetical protein.
  
     0.474
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.