STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI46464.1D-lactate dehydrogenase. (330 aa)    
Predicted Functional Partners:
AEI51123.1
Malic protein NAD-binding protein.
   
 0.941
AEI47200.1
Pyruvate kinase.
  
 0.939
Runsl_3317
L-lactate dehydrogenase (cytochrome).
  
 
 0.924
AEI50034.1
Rhodanese-like protein.
  
 0.918
AEI50772.1
D-lactate dehydrogenase (cytochrome).
   
 0.918
AEI46892.1
PEP-utilizing protein mobile region.
    
 0.914
AEI46893.1
Pyruvate, water dikinase.
    
 0.914
AEI50147.1
Beta-lactamase.
  
 0.910
AEI51223.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
    
  0.907
AEI47157.1
Pyruvate dehydrogenase (acetyl-transferring).
  
 
 0.906
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.