STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI46468.1Hypothetical protein. (309 aa)    
Predicted Functional Partners:
AEI49000.1
Signal transduction histidine kinase with CheB and CheR activity.
  
  
 0.820
AEI46467.1
Periplasmic protein.
       0.625
AEI50169.1
AAA ATPase.
  
     0.609
AEI49491.1
Multi-sensor hybrid histidine kinase.
  
  
 0.580
AEI49304.1
SMC domain protein.
  
     0.542
AEI51397.1
Multi-sensor hybrid histidine kinase.
  
  
 0.529
AEI46994.1
Hypothetical protein.
  
     0.507
AEI47046.1
Hypothetical protein.
  
  
 0.503
AEI48465.1
Hypothetical protein.
  
  
 0.503
AEI48952.1
Hypothetical protein.
  
  
 0.503
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.