Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEI46472.1Membrane-bound dehydrogenase domain protein. (1025 aa)    
Predicted Functional Partners:
AEI51546.1
Cytochrome c oxidase, cbb3-type, subunit I.
  
 
 0.963
AEI49351.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit.
  
 
 0.960
AEI47093.1
Protein of unknown function DUF1080.
 
     0.912
AEI48946.1
FAD dependent oxidoreductase.
  
 0.894
AEI47444.1
Rieske (2Fe-2S) iron-sulfur domain protein.
  
 0.884
AEI51481.1
Rieske (2Fe-2S) iron-sulfur domain protein.
  
 0.884
AEI49356.1
Cytochrome c oxidase subunit II.
   
 0.856
AEI49352.1
Polysulphide reductase NrfD.
   
 
 0.844
AEI48235.1
Translation elongation factor Tu.
  
 
 0.779
AEI49355.1
Hypothetical protein.
  
 
 0.779
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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