STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI46477.1Sialate O-acetylesterase. (467 aa)    
Predicted Functional Partners:
AEI50005.1
N-acylglucosamine 2-epimerase.
 
     0.594
AEI50906.1
N-acylglucosamine 2-epimerase.
 
     0.565
AEI49426.1
Esterase/lipase-like protein.
 
     0.562
AEI48693.1
Glycosyl hydrolase family 88.
 
      0.540
AEI49972.1
Esterase/lipase precursor.
 
     0.523
AEI50002.1
Na+/solute symporter.
  
     0.519
AEI50003.1
Glycosidase related protein.
  
     0.511
AEI50001.1
Mannan endo-1,4-beta-mannosidase.
 
   
 0.485
AEI46479.1
Hypothetical protein.
 
     0.479
AEI46478.1
Poly(3-hydroxybutyrate) depolymerase-like protein.
       0.437
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.