STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI46482.1Inorganic diphosphatase. (205 aa)    
Predicted Functional Partners:
AEI46600.1
ATP synthase subunit b.
   
 
 0.967
AEI46599.1
ATP synthase subunit delta.
   
 
 0.952
AEI47383.1
ATP synthase subunit alpha.
  
 
 0.943
AEI47385.1
ATP synthase gamma chain.
  
 
 0.938
AEI46601.1
ATP synthase subunit c.
   
 
 0.935
AEI48043.1
ATP synthase subunit beta.
   
 
 0.929
AEI46602.1
ATP synthase subunit a.
   
 
 0.927
AEI51259.1
Polyphosphate kinase.
     
 0.923
AEI48042.1
ATPase, F1 complex, delta/epsilon subunit.
   
 
  0.921
AEI48159.1
Hypothetical protein.
     
  0.900
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.