STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI46495.1PfkB domain protein. (671 aa)    
Predicted Functional Partners:
AEI50507.1
Molybdenum cofactor biosynthesis protein A.
  
    0.789
AEI50531.1
Phosphoheptose isomerase.
 
  
 0.775
AEI46496.1
Alpha-1,2-mannosidase.
       0.773
AEI47356.1
rfaE bifunctional protein.
 
     0.755
AEI47525.1
Glycosyl transferase family 9.
 
  
 0.725
AEI50096.1
Histidinol-phosphate phosphatase family protein.
 
  
 0.721
AEI51603.1
Glycosyl transferase family 9.
 
  
 0.665
AEI47325.1
Putative nucleoside-diphosphate-sugar pyrophosphorylase.
 
   
 0.648
AEI50726.1
Ribulose-phosphate 3-epimerase.
  
  
 0.615
AEI51869.1
Imidazoleglycerol-phosphate dehydratase.
  
  
 0.592
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.