STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI46516.1O-methyltransferase-like protein. (262 aa)    
Predicted Functional Partners:
AEI47213.1
Glycosyl transferase family 2.
 
     0.748
AEI47741.1
Hypothetical protein.
  
     0.720
AEI48595.1
Geranylgeranylglyceryl phosphate synthase.
  
    0.685
AEI47460.1
Hypothetical protein.
  
     0.660
AEI50480.1
Glycosyl transferase family 2.
 
     0.644
AEI46515.1
ApaG domain protein.
 
    0.628
AEI50505.1
Hypothetical protein.
  
     0.586
AEI46517.1
Transcriptional regulator, MarR family.
       0.548
AEI50479.1
Hypothetical protein.
 
     0.517
AEI49387.1
Putative membrane protein.
 
     0.514
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.