STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI46539.1Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen. (494 aa)    
Predicted Functional Partners:
AEI46538.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
 
    
0.788
AEI47335.1
Putative membrane protein.
  
     0.747
AEI48622.1
Protein of unknown function DUF303 acetylesterase.
  
    0.731
AEI51196.1
Protein of unknown function DUF303 acetylesterase.
  
    0.683
AEI50162.1
Hypothetical protein.
  
    0.675
AEI48127.1
Hypothetical protein.
  
     0.669
AEI47048.1
Hypothetical protein.
  
    0.653
Runsl_0856
PKD domain containing protein.
  
    0.648
AEI50491.1
Hypothetical protein.
  
    0.647
AEI48665.1
Hypothetical protein.
  
    0.614
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.