STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI46540.1ATP-dependent Clp protease adaptor protein ClpS. (95 aa)    
Predicted Functional Partners:
AEI47780.1
Ferritin Dps family protein.
   
 
 0.870
AEI47982.1
ATP-dependent chaperone ClpB.
  
 
 0.839
AEI51511.1
ATPase AAA-2 domain protein.
  
 
 0.839
AEI51609.1
ATPase AAA-2 domain protein.
  
 
 0.839
AEI49531.1
Gliding motility-associated lipoprotein GldD.
  
     0.737
AEI46541.1
Na+/solute symporter.
 
     0.733
AEI48464.1
Hypothetical protein.
  
     0.718
AEI47283.1
Gliding motility-associated lipoprotein GldH.
  
     0.716
AEI48136.1
Hypothetical protein.
  
     0.711
AEI48955.1
ATP-dependent Clp protease proteolytic subunit.
   
 
 0.677
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.