STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI46571.1Parallel beta-helix repeat protein. (468 aa)    
Predicted Functional Partners:
AEI46570.1
Hypothetical protein.
  
 0.964
AEI46569.1
Nitrous-oxide reductase.
 
  
 0.947
AEI46573.1
Nitrous-oxide metabolic protein NosY.
 
  
 0.936
AEI46572.1
ABC transporter related protein.
  
 0.926
AEI46568.1
Cytochrome c class I.
 
    0.892
AEI46567.1
Putative transcriptional regulator, Crp/Fnr family.
 
     0.645
AEI47001.1
Hemerythrin HHE cation binding domain protein.
 
     0.568
AEI49317.1
Hypothetical protein.
 
     0.460
AEI46574.1
beta-Ig-H3/fasciclin.
       0.440
AEI51549.1
Hypothetical protein.
 
     0.413
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.