STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI46597.1Transcriptional coactivator/pterin dehydratase. (79 aa)    
Predicted Functional Partners:
AEI51427.1
Phenylalanine 4-monooxygenase.
 
 0.990
AEI49319.1
Homogentisate 12-dioxygenase.
  
  
 0.617
AEI46596.1
Stress responsive alpha-beta barrel domain-containing protein.
       0.533
AEI51428.1
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.492
AEI51732.1
methylmalonyl-CoA epimerase.
  
  
 0.492
AEI46595.1
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing).
       0.416
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.