STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI46597.1Transcriptional coactivator/pterin dehydratase. (79 aa)    
Predicted Functional Partners:
AEI51427.1
Phenylalanine 4-monooxygenase.
 
 0.988
AEI49319.1
Homogentisate 12-dioxygenase.
  
  
 0.601
AEI46596.1
Stress responsive alpha-beta barrel domain-containing protein.
       0.533
AEI51428.1
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.492
AEI51732.1
methylmalonyl-CoA epimerase.
  
  
 0.492
AEI46495.1
PfkB domain protein.
  
  
 0.455
AEI46595.1
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing).
  
    0.425
AEI46933.1
Protein of unknown function DUF1446.
  
  
 0.418
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.