STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI46622.1Heat shock protein Hsp20. (138 aa)    
Predicted Functional Partners:
AEI51166.1
60 kDa chaperonin.
   
 
 0.699
AEI47982.1
ATP-dependent chaperone ClpB.
  
 
 0.629
AEI51511.1
ATPase AAA-2 domain protein.
  
 
 0.629
AEI51609.1
ATPase AAA-2 domain protein.
  
 
 0.629
AEI51886.1
Heat shock protein Hsp90.
  
 
 0.559
AEI49456.1
Protein grpE.
  
  
 0.497
AEI47136.1
Heat shock protein 70.
  
 
 0.489
AEI51312.1
Chaperone protein dnaK.
  
 
 0.489
AEI50442.1
YjeF-related protein.
 
  
 0.481
AEI46686.1
ATP-dependent protease hslV.
   
  
 0.461
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.