STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI46628.1Butyryl-CoA dehydrogenase. (599 aa)    
Predicted Functional Partners:
AEI51807.1
3-hydroxybutyryl-CoA epimerase.
 
 0.925
AEI50733.1
Electron transfer flavoprotein alpha subunit.
 
 0.900
AEI48170.1
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein.
  
 0.898
AEI50734.1
Electron transfer flavoprotein alpha/beta-subunit.
 
 
 0.857
AEI46627.1
Long-chain-fatty-acid--CoA ligase.
 
 
 0.844
AEI48252.1
(R)-benzylsuccinyl-CoA dehydrogenase.
  
     0.751
AEI48646.1
Enoyl-CoA hydratase.
 
 0.726
AEI50659.1
Enoyl-CoA hydratase/isomerase.
 
 0.713
AEI48711.1
Aminomethyltransferase.
  
 0.706
AEI48559.1
Aminoglycoside phosphotransferase.
 
 
 0.701
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (32%) [HD]