STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI46635.1Methyltransferase type 12. (241 aa)    
Predicted Functional Partners:
AEI46636.1
Glycosyl transferase family 39.
 
     0.828
AEI51708.1
Methyltransferase type 11.
  
     0.763
AEI49409.1
LytTr DNA-binding region.
  
     0.721
AEI51086.1
Hypothetical protein.
  
     0.716
AEI51229.1
RagB/SusD domain-containing protein.
  
    0.710
AEI51756.1
Proteinase inhibitor I2 Kunitz metazoa.
  
     0.701
AEI51822.1
Hypothetical protein.
  
     0.683
AEI47539.1
Hypothetical protein.
  
     0.633
AEI47540.1
TonB-dependent receptor plug.
  
     0.627
AEI50162.1
Hypothetical protein.
  
     0.617
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.