Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI46658.1Radical SAM domain protein. (200 aa)    
Predicted Functional Partners:
AEI49833.1
6-pyruvoyl tetrahydropterin synthase and hypothetical protein.
 
 
 0.986
AEI51558.1
6-pyruvoyl tetrahydropterin synthase and hypothetical protein.
 
 
 0.986
AEI46657.1
OmpA/MotB domain protein.
       0.819
Runsl_2546
Hypothetical protein.
  
     0.702
AEI47039.1
acyl-CoA reductase.
  
     0.581
AEI46659.1
CBS domain containing protein.
     
 0.579
AEI47030.1
GMP synthase (glutamine-hydrolyzing).
 
   
 0.548
AEI46656.1
Thioredoxin reductase.
     
 0.501
AEI51559.1
GTP cyclohydrolase 1.
  
  
 0.484
AEI50080.1
Quinolinate synthase A.
 
   
 0.458
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.