STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI46658.1Radical SAM domain protein. (200 aa)    
Predicted Functional Partners:
AEI49833.1
6-pyruvoyl tetrahydropterin synthase and hypothetical protein.
 
 
 0.983
AEI51558.1
6-pyruvoyl tetrahydropterin synthase and hypothetical protein.
 
 
 0.983
AEI46657.1
OmpA/MotB domain protein.
     
 0.815
Runsl_2546
Hypothetical protein.
  
     0.702
AEI47039.1
acyl-CoA reductase.
  
   
 0.581
AEI46659.1
CBS domain containing protein.
       0.575
AEI46656.1
Thioredoxin reductase.
     
 0.526
AEI47030.1
GMP synthase (glutamine-hydrolyzing).
 
   
 0.511
AEI51559.1
GTP cyclohydrolase 1.
  
  
 0.483
AEI50080.1
Quinolinate synthase A.
 
   
 0.470
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.