STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI46667.1Beta-lactamase. (843 aa)    
Predicted Functional Partners:
AEI46666.1
Protein of unknown function DUF1611.
 
     0.689
AEI50627.1
Hypothetical protein.
  
     0.615
AEI46665.1
Chloromuconate cycloisomerase.
 
    0.602
AEI50600.1
Peptidase S9 prolyl oligopeptidase active site domain protein.
  
     0.503
AEI46668.1
Transcriptional regulator, AsnC family.
       0.488
AEI47000.1
Beta-lactamase.
 
     0.477
AEI46851.1
Peptidase M20.
 
    0.475
AEI47381.1
ADP-heptose:LPS heptosyltransferase-like protein.
  
     0.463
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.