STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI46708.1Adenylate/guanylate cyclase. (344 aa)    
Predicted Functional Partners:
AEI49180.1
Transcriptional regulator, AraC family.
  
 
 0.939
AEI49949.1
(p)ppGpp synthetase I, SpoT/RelA.
     
 0.915
AEI48787.1
Nucleoside diphosphate kinase.
    
 0.909
AEI46723.1
Integral membrane sensor signal transduction histidine kinase.
 
 
 0.861
AEI46709.1
Response regulator receiver protein.
 
 
0.851
AEI46724.1
ATP-binding region ATPase domain protein.
 
 
 0.828
AEI46725.1
Integral membrane sensor signal transduction histidine kinase.
 
 
 
 0.827
AEI46726.1
Integral membrane sensor signal transduction histidine kinase.
 
 
 
 0.827
AEI47784.1
Signal transduction histidine kinase, nitrogen specific, NtrB.
  
 
 0.827
AEI46857.1
Multi-sensor signal transduction histidine kinase.
 
 
 
 0.826
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.