STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI46741.1Response regulator receiver protein. (154 aa)    
Predicted Functional Partners:
AEI47414.1
Multi-sensor signal transduction histidine kinase.
 
 
 
 0.804
AEI47789.1
Integral membrane sensor signal transduction histidine kinase.
 
  
 0.802
AEI49000.1
Signal transduction histidine kinase with CheB and CheR activity.
 
 
 0.789
AEI47470.1
Response regulator receiver.
 
   0.783
AEI49490.1
Multi-sensor signal transduction histidine kinase.
 
 
 0.776
AEI47786.1
PAS/PAC sensor signal transduction histidine kinase.
  
     0.771
AEI51817.1
PAS/PAC sensor signal transduction histidine kinase.
 
 
 
 0.768
AEI50746.1
Integral membrane sensor signal transduction histidine kinase.
  
     0.755
AEI47416.1
Putative PAS/PAC sensor protein.
 
 
 0.728
AEI49491.1
Multi-sensor hybrid histidine kinase.
  
 
 0.561
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.